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许多生物序列比对软件工具可导入本部分的.fna 文件。
Any number of biological sequence comparison software tools can be used to import the .fna files in this section.
问题集1(PDF)
Problem Set 1 (PDF) |
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以下.fna 文件包含了大肠杆菌的核酸序列，为FASTA格式. FASTA格式的序列开头是一行描述语，随后为序列数据。描述行的第一列标有大于号(“>”)，与数据行区分。(FNA 4.5 MB)
The .fna file below contains the nucleic acid sequence of E. coli in the FASTA format. A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. The description line is distinguished from the sequence data by a greater-than (">") symbol in the first column. (FNA 4.5 MB) |
问题集2 (PDF)
Problem Set 2 (PDF) |
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Altschul等人在BLAST上的文章
Article by Altschul et al on BLAST |
问题集3
Problem Set 3 (PDF) |
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以下.fna 文件包含了大肠杆菌的核酸序列，为FASTA格式. FASTA格式的序列开头是一行描述语，随后为序列数据。描述行的第一列标有大于号(“>”)，与数据行区分。 (FNA 4.5 MB)
The .fna file below contains the nucleic acid sequence of E. coli in the FASTA format. A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. The description line is distinguished from the sequence data by a greater-than (">") symbol in the first column. (FNA 4.5 MB) |
问题集4(PDF)
Problem Set 4 (PDF) |
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RNA 钳
The RNA Puller
问题集4解答(PDF)
Result of Problem 4 (PDF) |
问题集5 (PDF)
Problem Set 5 (PDF) |
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问题集6
Problem Set 6 (PDF) |
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Miyazawa, Sanzo和Robert L. Jernigan (MJ). 〈有利的接触配对条件与不利的高组装密度条件下，仿真与外螺纹制造法的残基相互作用势〉，《分子生物学期刊》
Miyazawa, Sanzo, and Robert L. Jernigan (MJ). "Residue–Residue Potentials with a Favorable Contact Pair Term and an Unfavorable High Packing Density Term, for Simulation and Threading." JMB.
MJ 相互作用作用表 (3)(PDF)
MJ Interaction Table (3) (PDF)
问题集答案3(D)(PDF)
Result of Problem 3(D) (PDF) |
问题集7
Problem Set 7 (PDF) |
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问题集8
Problem Set 8 (PDF) |
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课堂讲稿：耗散动力学(PDF)
Lecture notes on 'Dissipative Dynamics' (PDF) |
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