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审定:鲍军波(简介并寄信)
翻译:温荣弘(简介并寄信)
编辑:汪仁杰(简介并寄信)

下列读物提供了本课程的基础。 如果有的话,点击链结看看文章的摘要。读物是以主题作为分类。
The readings listed below provide the foundation of this course. Click on the links to view abstracts for the journal articles, where available. Readings are arranged by topic.




Water

Ball, Philip. 《生命的基质》 University of California Press, 2001.
Ball, Philip. Life’s Matrix. University of California Press, 2001.

Matthews, Christopher K., and K. E. Van Holde. 《生物化学》 2nd ed. Menlo Park, CA: Benjamin Cummings Publishing Company, 1996.
Matthews, Christopher K., and K. E. Van Holde. Biochemistry. 2nd ed. Menlo Park, CA: Benjamin Cummings Publishing Company, 1996.

氨基酸
Amino Acids

Stryer, Lubert. 《生物化学》 第四版. New York: W. H. Freeman & Co., 1995.
Stryer, Lubert. Biochemistry. 4th ed. New York: W. H. Freeman & Co., 1995.

Zubay, Geoffrey. 《生物化学》 3rd ed. Oxford, UK: W. C. Brown Publishers, 1993.
Zubay, Geoffrey. Biochemistry. 3rd ed. Oxford, UK: W. C. Brown Publishers, 1993.

Matthews, Christopher K., and K. E. Van Holde. 《生物化学》 2nd ed. Menlo Park, CA: Benjamin Cummings Publishing Company, 1996.
Matthews, Christopher K., and K. E. Van Holde. Biochemistry. 2nd ed. Menlo Park, CA: Benjamin Cummings Publishing Company, 1996.

Branden, Carl, and Tooze, John. 《蛋白质结构导论》 New York: Garland Publishing, Inc., 1999.
Branden, Carl, and Tooze, John. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》 New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

蛋白质的一级和二级结构
Primary and Secondary Structures of Proteins

Dickerson, Richard. 《蛋白质的结构与作用》 New York: Harper & Row Publishers, 1969.
Dickerson, Richard. The Structure and Action of Proteins. New York: Harper & Row Publishers, 1969.

Pauling, Linus. 《化学键的本质:结构特性》 2nd ed. New York: Cornell University Press, 1960.
Pauling, Linus. The Nature of Chemical Bond: Structural Properties. 2nd ed. New York: Cornell University Press, 1960.

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

螺旋
Helices

Dickerson, Richard. 《蛋白质的结构与作用》, 1969.
Dickerson, Richard. The Structure and Action of Proteins, 1969.

Pauling, Linus. 《化学键的本质:结构特性》, 2nd ed. New York: Cornell University Press, 1960.
Pauling, Linus. The Nature of Chemical Bond: Structural Properties, 2nd ed. New York: Cornell University Press, 1960.

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

Crick, Fancis. 〈a-螺旋的组成:简单的卷曲螺旋〉,《晶体学刊》 6 (1953): 689-697.
Crick, Fancis. "The packing of a-helices: Simple Coiled-Coils." Acta. Cryst 6 (1953): 689-697.

O'Shea, E. K., J. D. Klemm, P. S. Kim, 与 T. Alber. 平行卷曲螺旋─GCN4亮氨酸拉链结构的X射线射线构造《科学》 254 (1991): 539-44.
O'Shea, E. K., J. D. Klemm, P. S. Kim, and T. Alber. X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil. Science 254 (1991): 539-44.

Lovejoy, B., S. Choe, D. Cascio, D. K. McRorie, W. F. DeGrado, and D. Eisenberg. 合成的三股α-螺旋束的晶体结构《科学》 259 (1993): 1288-93.
Lovejoy, B., S. Choe, D. Cascio, D. K. McRorie, W. F. DeGrado, and D. Eisenberg. Crystal structure of a synthetic triple-stranded alpha-helical bundle. Science 259 (1993): 1288-93.

Lumb, K. J., and P. S. Kim. GCN4GCN4亮氨酸拉链结构的中螺旋间静电作用的测量《科学》 268 (1995): 436-9.
Lumb, K. J., and P. S. Kim. Measurement of interhelical electrostatic interactions in the GCN4 leucine zipper. Science 268 (1995): 436-9.

Kohn, W. D., C. T. Mant, and R. S. Hodges. α-螺旋蛋白构装动机《生物化学期刊》 272 (1997): 2583-6. Review.
Kohn, W. D., C. T. Mant, and R. S. Hodges. Alpha-helical protein assembly motifs. J Biol Chem 272 (1997): 2583-6. Review.

β折叠
Beta-Sheets

Pauling, Linus, and Robert B. Corey. 〈折叠,多肽链的新型层状结构〉,《美国国家科学会公报》 37 (May 15, 1951): 251-256.
Pauling, Linus, and Robert B. Corey. "The Pleated Sheet, a new layer configuration of polypeptide chains." PNAS 37 (May 15, 1951): 251-256.

Pauling, Linus, and Robert B. Corey. 〈具有单键附近取向的多肽链结构:两种新型折叠结构〉,《美国国家科学会公报》 37, no. 5 (May 15, 1951): 729-740.
Pauling, Linus, and Robert B. Corey. "Configurations of Polypeptide Chains with Favored Orientations around Single Bonds: two new pleated sheets." PNAS 37, no. 5 (May 15, 1951): 729-740.

X射线晶体学
X-Ray Crystallography

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

核磁共振
NMR

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

分子结构(II)中用到的研究和分析工具:园二色仪圆二色、拉曼、傅立叶变换红外光谱、原子力显微镜、透射电子显微镜、扫瞄电子显微镜、光散射
Tools Used in Study and Analyses of Molecular Structures (II): Circular Dichroism, Raman, FTIR, AFM, TEM, SEM, Light Scattering

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

转换:其它纤维蛋白的分子结构
Transition: Molecular Structure of Other Fibrous Proteins

Branden, Carl, and John Tooze. 《蛋白质结构导论》. New York: Garland Publishing, Inc., 1999.
Branden, Carl, and John Tooze. Introduction to Protein Structure. New York: Garland Publishing, Inc., 1999.

Creighton, Thomas. 《蛋白质、结构与分子性质》. New York: W. H. Freeman & Co., 1993.
Creighton, Thomas. Proteins, Structures and Molecular Properties. New York: W. H. Freeman & Co., 1993.

胶原蛋白的分子结构
Molecular Structure of Collagen

Ayad, Shirley, et. al. 《细胞外间质手册》 2nd ed. San Diego, CA: AP Factsbooks, 1998.
Ayad, Shirley, et. al. The Extracellular Matrix Factsbook. 2nd ed. San Diego, CA: AP Factsbooks, 1998.

Yurchenco, Peter, et al., eds. 《细胞外间质组装与结构》 San Diego, CA: AP, 1994.
Yurchenco, Peter, et al., eds. Extracellular Matrix Assembly & Structure. San Diego, CA: AP, 1994.

Ramachandran, G. N., ed. 《胶原蛋白的协定》 San Diego, CA: AP, 1967.
Ramachandran, G. N., ed. Treaties on Collagen. San Diego, CA: AP, 1967.

Pauling, Linus, 与 Robert B. Corey. 〈胶原及明胶蛋白类的丝形蛋白结构〉,《美国国家科学会公报》 37, (1951): 272-281.
Pauling, Linus, and Robert B. Corey. "The Structure of Fibrous Proteins of the Collagen-Gelatin Group." PNAS 37, (1951): 272-281.

Highberger, John, Jerome Gross, 与 Francis Schmitt. 〈微蛋白与可溶胶原的相互作用与电子显微镜研究〉,《美国国家科学会公报》 37 (1951): 286-293.
Highberger, John, Jerome Gross, and Francis Schmitt. "The Interaction of Microportein with Soluble Collagen; and Electron Microscope Study." PNAS 37 (1951): 286-293.

Rich, Alexander, 与 Francis Crick. 〈胶原结构〉,《科学》 176, (1955): 915-916.
Rich, Alexander, and Francis Crick. "The Structure of Collagen." Nature 176, (1955): 915-916.

Rich, A. 〈跟随交原〉,《自然结构生物学》 5, 8 (Aug 1998): 675.
Rich, A. "Follow that Fiber." Nat Struct Biol. 5, 8 (Aug 1998): 675.

———. 〈螺旋胶原〉,《自然结构生物学》 5, 9 (Sep 1998): 760.
———. "Chasing Collagen." Nat Struct Biol. 5, 9 (Sep 1998): 760.

———. 〈胶原结构〉,《自然结构生物学》 5 ,10 (Oct 1998): 858-9.
———. "Structure of Collagen." Nat Struct Biol. 5 ,10 (Oct 1998): 858-9.

Bella, J., M. Eaton, B. Brodsky, 与 H. M. Berman. 〈1.9A1.9A分辨率下的胶原类肽的晶体与分子结构〉,《科学》 266, 5182 (7 Oct 1994): 75-81.
Bella, J., M. Eaton, B. Brodsky, and H. M. Berman. "Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution." Science 266, 5182 (7 Oct 1994): 75-81.

Bella J, B. Brodsky, 与 H. M. Berman. 〈胶原肽之水合结构〉,《结构》 3, 9 (15 Sep 1995): 893-906.
Bella J, B. Brodsky, and H. M. Berman. "Hydration Structure of a Collagen Peptide." Structure 3, 9 (15 Sep 1995): 893-906.

Kramer R. Z., J. Bella, B. Brodsky, 与 H. M. Berman. "附带生物相关序列胶原类肽的结晶与分子结构〉,《分子生物学期刊》 311, 1 (3 Aug 2001): 131-47.
Kramer R. Z., J. Bella, B. Brodsky, and H. M. Berman. "The crystal and molecular structure of a collagen-like peptide with a biologically relevant sequence." J Mol Biol. 311, 1 (3 Aug 2001): 131-47.

Engel J, 与 D. J. Prockop. 〈结合水是否促进胶原的稳定性?《基质生物学》 17, 8-9 (Dec 1998): 679-80.
Engel J, and D. J. Prockop. "Does bound water contribute to the stability of collagen?" Matrix Biol. 17, 8-9 (Dec 1998): 679-80.

Pauling, Linus, 与 Robert B. Corey. 〈羽脊角蛋白之构造〉,《美国国家科学会公报》 37, 5 (15 May 1951): 256-261.
Pauling, Linus, and Robert B. Corey. "The Structure of Feather Rachis Keratin." PNAS 37, 5 (15 May 1951): 256-261.

丝蛋白
Silk

Kaplan, David, Wade Adams, Barry Farmer, and Christopher Viney, eds. 《丝蛋白聚合物:材料科学与生物科技》 ACS Sympoisum Series 544, (1993).
Kaplan, David, Wade Adams, Barry Farmer, and Christopher Viney, eds. Silk Polymers: Materials Science & Biotechnology. ACS Sympoisum Series 544, (1993).

Van Beek, J. D., L. Beaulieu, H. Schafer, M. Demura, T. Asakura, and B. H. Meier.〈固态核磁共振测定蓖麻蚕丝之次级结构《自然》405, 6790 (29 Jun 2000): 1077-9.
Van Beek, J. D., L. Beaulieu, H. Schafer, M. Demura, T. Asakura, and B. H. Meier. "Solid-state NMR determination of the secondary structure of Samia cynthia ricini silk." Nature 405, 6790 (29 Jun 2000): 1077-9.

Tirrell, D. A. 〈蜘蛛丝的全新诠释《科学》271, 5245 (5 Jan 1996): 39-40.
Tirrell, D. A. "Putting a new spin on spider silk." Science 271, 5245 (5 Jan 1996): 39-40.

Hayashi, C. Y., and R. V. Lewis.〈人工蜘蛛丝蛋白质基因的分子建构与演化《科学》 287, 5457 (25 Feb 2000): 1477-9.
Hayashi, C. Y., and R. V. Lewis. "Molecular architecture and evolution of a modular spider silk protein gene." Science 287, 5457 (25 Feb 2000): 1477-9.

———. 〈从鞭状丝蛋白cDNA得到蜘蛛丝分子本质与弹性结构基础的证据《分子生物学期刊》275, 5 (6 Feb 1998): 773-84.
———. Evidence from flagelliform silk cDNA for the structural basis of elasticity and modular nature of spider silks." J Mol Biol. 275, 5 (6 Feb 1998): 773-84.

Mita, K., S. Ichimura, M. Zama, and T. C. James. 〈特定遗传密码使用模式在丝纤维蛋白mRNA次级结构之含意《分子生物学期刊》203, 4 (20 Oct 1988):917-25.
Mita, K., S. Ichimura, M. Zama, and T. C. James. "Specific codon usage pattern and its implications on the secondary structure of silk fibroin mRNA." J Mol Biol. 203, 4 (20 Oct 1988):917-25.

Mori, S., S. Izumi, and S. Tomino. 〈家蚕主要血浆蛋白基因之结构与组织《分子生物学期刊》218, 1 (5 Mar 1991): 7-12.
Mori, S., S. Izumi, and S. Tomino. "Structures and organization of major plasma protein genes of the silkworm Bombyx mori." J Mol Biol. 218, 1 (5 Mar 1991): 7-12.

Valluzzi, R., S. Winkler, D. Wilson, and D. L. Kaplan.〈丝蛋白:分子组织与组装控制《英国伦敦皇家协会哲学会报B系列之生物科学》357, 1418 (Feb 2002): 165-7.
Valluzzi, R., S. Winkler, D. Wilson, and D. L. Kaplan. "Silk: molecular organization and control of assembly." Philos Trans R Soc Lond B Biol Sci. 357, 1418 (Feb 2002): 165-7.

Seidel, A., O. Liivak, S. Calve, J. Adaska, G. Ji, Z. Yang, D. Grubb, D. B. Zax, and L. W. Jelinski.〈再生的蜘蛛丝:加工、性质与结构〉《巨分子》33, 3 (2000): 775-780.
Seidel, A., O. Liivak, S. Calve, J. Adaska, G. Ji, Z. Yang, D. Grubb, D. B. Zax, and L. W. Jelinski. "Regenerated Spider Silk: Processing, Properties, and Structure." Macromolecules 33, 3 (2000): 775-780.

生物矿物I:贝壳和硅藻
Biominerals I: Shell and Diatom

Mann, Stephen, ed. 《生物矿化作用》 VCH Publishers Inc., 1996.
Mann, Stephen, ed. Biomineralization. VCH Publishers Inc., 1996.

Simkies, Kenneth, and Karl Wilbur. 《生物矿化作用:细胞生物学与矿物沉积》 San Diego, CA: Academic Press, 1989.
Simkies, Kenneth, and Karl Wilbur. Biomineralization: Cell Biology & Mineral Deposition. San Diego, CA: Academic Press, 1989.

Frankel, Richard, and Richard Blackmore, eds. 《铁质生物矿物》 New York: Plenum Press, 1991.
Frankel, Richard, and Richard Blackmore, eds. Iron Biominerals. New York: Plenum Press, 1991.

K, Shimizu, Cha J., G. D. Stucky, and D. E. Morse. 〈硅蛋白α:海棉生物硅中似组织蛋白酶L之蛋白质《美国国家科学院刊》95, (1998): 6234-8.
K, Shimizu, Cha J., G. D. Stucky, and D. E. Morse. "Silicatein alpha: cathepsin L-like protein in sponge biosilica." Proc Natl Acad Sci U S A. 95, (1998): 6234-8.

Cha, J. N., Shimizu K, Y. Zhou, S. C. Christiansen, B. F. Chmelka, G. D. Stucky, and D. E. Morse. 〈海棉中的硅蛋白细丝与次单位控制体外二氧化硅与聚硅酮的聚合〉《美国国家科学院刊》96, (1999): 361-5.
Cha, J. N., Shimizu K, Y. Zhou, S. C. Christiansen, B. F. Chmelka, G. D. Stucky, and D. E. Morse. "Silicatein filaments and subunits from a marine sponge direct the polymerization of silica and silicones in vitro." Proc Natl Acad Sci U S A. 96, (1999): 361-5.

Aizenberg, J., A. Tkachenko, S. Weiner, L. Addadi, and G. Hendler.〈方解石微晶透镜作为脆海星视觉感受系统一部份《自然》412, (2001): 819-22.
Aizenberg, J., A. Tkachenko, S. Weiner, L. Addadi, and G. Hendler. "Calcitic microlenses as part of the photoreceptor system in brittlestars." Nature 412, (2001): 819-22.

Falini, Giuseppe, Shira Albeck, Steve Weiner, and Lia Addadi.〈藉由软件动物壳巨分子控制霰石或方解石多态性〉《科学》271, (1996): 67-69.
Falini, Giuseppe, Shira Albeck, Steve Weiner, and Lia Addadi. "Control of Aragonite or Calcite Polymorphism by Mollusk Shell Macromolecules." Science 271, (1996): 67-69.

生物矿物II:骨骼和牙齿
Biominerals II: Bone and Teeth

Weiner, S., A. Veis, E. Beniash, T. Arad, J. W. Dillon, B. Sabsay, and F. Siddiqui. 〈腔外牙本质形成:人类牙齿中之晶体构造与巨分子组成物《结构生物学期刊》126, 1 (1 Jun 1999): 27-41.
Weiner, S., A. Veis, E. Beniash, T. Arad, J. W. Dillon, B. Sabsay, and F. Siddiqui. "Peritubular dentin formation: crystal organization and the macromolecular constituents in human teeth." J Struct Biol. 126, 1 (1 Jun 1999): 27-41.

Wang, R. Z., and S. Weiner. 〈人类牙齿中使用云纹条纹之压力结构关系《生物机能期刊》31, 2 (1998): 135-41.
Wang, R. Z., and S. Weiner. "Strain-structure relations in human teeth using Moire fringes." J Biomech. 31, 2 (1998): 135-41.

Weiner, S., W. Traub, and H. D. Wagner. 〈板状骨:结构功能关系《生物机能期刊》126, 3 (1999): 241-55.
Weiner, S., W. Traub, and H. D. Wagner. "Lamellar bone: structure-function relations." J Struct Biol. 126, 3 (1999): 241-55.

Wang, R., and S. Weiner.〈人类牙根:结构非均向性与维克微硬度等向性《连结组织研究》39, 4 (1998): 269-79.
Wang, R., and S. Weiner. "Human root dentin: structural anisotropy and Vickers microhardness isotropy." Connect Tissue Res. 39, 4 (1998): 269-79.

Weiner, S., and H. D. Wagner.〈材料骨:结构机能之功能关系〉《年度材料科学回顾》 Vol. 28 (1998): 271-298.
Weiner, S., and H. D. Wagner. "THE MATERIAL BONE: Structure-Mechanical Function Relations." Annu. Rev. Mater. Sci. Vol. 28 (1998): 271-298.

硅藻的结构
Structure of Diatoms

Sarikaya, Mehmet, and Ilhan Aksay, eds. 《生物仿真学:材料设计与处理》 New York:AIP Series, 1995.
Sarikaya, Mehmet, and Ilhan Aksay, eds. Biomimetics: Design and Processing of Materials. New York:AIP Series, 1995.

Kroger, N., R. Deutzmann, and M. Sumper.〈硅藻生物硅中左右硅纳米超微粒组成之聚阳离子型肽《科学》286, (1999): 1129-32.
Kroger, N., R. Deutzmann, and M. Sumper. "Polycationic peptides from diatom biosilica that direct silica nanosphere formation." Science 286, (1999): 1129-32.

———. 〈硅藻中的硅沉淀。Cylindrotheca fusiformis中的silaffin-A化学结构〉《生物化学期刊》276, (2001): 26066-70.
———. "Silica-precipitating peptides from diatoms. The chemical structure of silaffin-A from Cylindrotheca fusiformis." J Biol Chem 276, (2001): 26066-70.

Kroger, N., C. Bergsdorf, and M. Sumper.〈Frustulins:与海藻细胞壁相关的蛋白质系中之区域保育〉《欧洲生物化学期刊》239, (1996): 259-64.
Kroger, N., C. Bergsdorf, and M. Sumper. "Frustulins: domain conservation in a protein family associated with diatom cell walls." Eur J Biochem 239, (1996): 259-64.

———. 〈新兴钙结合糖蛋白系形成主要的海藻细胞壁元素〉《欧洲分子生物学组织期刊》13, (1994): 4676-83.
———. "A new calcium binding glycoprotein family constitutes a major diatom cell wall component." EMBO J. 13, (1994): 4676-83.

Kroger, N., G. Lehmann, R. Rachel, and M. Sumper.〈具体与细胞壁硅基构造连结的200-kDa海藻蛋白特性〉《欧洲生物化学期刊》250, (1997): 99-105.
Kroger, N., G. Lehmann, R. Rachel, and M. Sumper. "Characterization of a 200-kDa diatom protein that is specifically associated with a silica-based substructure of the cell wall." Eur J Biochem 250, (1997): 99-105.

脱氧核糖核酸和核糖核酸的分子结构
Molecular Structure of DNA and RNA

Watson, J. D., and F. H. Crick.〈核酸之分子结构:脱氧核糖核酸之结构〉《自然》 no. 4356 (25 April 1953).
"Molecular structure of nucleic acids: a structure for deoxyribose nucleic acid." Nature, no. 4356 (25 April 1953).

———. 〈核酸之分子结构:脱氧核糖核酸之结构《自然》248, 451 (26 Apr 1974): 765.
———. "Molecular structure of nucleic acids: a structure for deoxyribose nucleic acid." Nature 248, 451 (26 Apr 1974): 765.

Wang, A. H., G. J. Quigley, F. J. Kolpak, J. L. Crawford, J. H. van Boom, G. van der Marel, and A. Rich. 〈原子解析中左旋双螺旋糖DNA碎片之分子结构《自然》282, 5740 (13 Dec 1979): 680-6.
Wang, A. H., G. J. Quigley, F. J. Kolpak, J. L. Crawford, J. H. van Boom, G. van der Marel, and A. Rich. "Molecular structure of a left-handed double helical DNA fragment at atomic resolution." Nature 282, 5740 (13 Dec 1979): 680-6.

脱氧核糖核酸分子机械
DNA Molecular Machines

Bethell, D., and D. J. Schiffrin.〈超分子化学:纳米科技与核苷酸《自然》 382, (1996): 581.
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Schmidbaur, H.〈超分子化学:金的应用《自然》413, (2001): 31, 33.
Schmidbaur, H. "Supramolecular chemistry. Going for gold." Nature 413, (2001): 31, 33.

Alivisatos, A. P., K. P. Johnsson, X. Peng, T. E. Wilson, C. J. Loweth, M. P. Bruchez, Jr., and P. G. Schultz. 〈使用DNA组装“纳米分子”《自然》 382, (1996): 609-11.
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Mao, C., W. Sun, Z. Shen, and N. C. Seeman. 〈基于DNA B-Z转换的纳米机械装置《自然》397, 6715 (14 Jan): 144-6.
Mao, C., W. Sun, Z. Shen, and N. C. Seeman. "A nanomechanical device based on the B-Z transition of DNA." Nature 397, 6715 (14 Jan): 144-6.

Yurke, B., A. J. Turberfield, A. P. Mills Jr., F. C. Simmel, and J. L. Neumann.〈由DNA组成的DNA燃料分子机械《自然》 406, (2000): 605-8.
Yurke, B., A. J. Turberfield, A. P. Mills Jr., F. C. Simmel, and J. L. Neumann. "A DNA-fuelled molecular machine made of DNA." Nature 406, (2000): 605-8.

Braun, E., Y. Eichen, U. Sivan, and G. Ben-Yoseph. 〈DNA楔形组装与银导线电极附加装置《自然》391, (1998): 775-8.
Braun, E., Y. Eichen, U. Sivan, and G. Ben-Yoseph. "DNA-templated assembly and electrode attachment of a conducting silver wire." Nature 391, (1998): 775-8.

Winfree, E., F. Liu, L. A. Wenzler, and N. C. Seeman. 〈二维DNA结晶之设计与自组装《自然》394, 6693 (6 Aug 1998): 539-44.
Winfree, E., F. Liu, L. A. Wenzler, and N. C. Seeman. "Design and self-assembly of two-dimensional DNA crystals." Nature 394, 6693 (6 Aug 1998): 539-44.

Chen, J. H., and N. C. Seeman.〈一个分子DNA与立方连结之合成〉《自然》 350, (1991): 631-3.
Chen, J. H., and N. C. Seeman. "Synthesis from DNA of a molecule with the connectivity of a cube." Nature 350, (1991): 631-3.

作为建造材料的脂质的自组装
Self-Assembly of Lipids as Building Materials

Groves, J. T., S. G. Boxer, and H. M. McConnell.〈双组份支持双层膜之电场诱导重组《美国国家科学会公报》 94, (1997): 13390-5.
Groves, J. T., S. G. Boxer, and H. M. McConnell. "Electric field-induced reorganization of two-component supported bilayer membranes." Proc Natl Acad Sci U S A. 94, (1997): 13390-5.

Lvov, Y. M., R. R. Price, J. V. Selinger, A. Singh, M. S. Spector, J. M. Schnur, and Langmuir. 〈生物衍生微结构之纳米形态图像〉《2000》16: 5932-5935.
Lvov, Y. M., R. R. Price, J. V. Selinger, A. Singh, M. S. Spector, J. M. Schnur,
and Langmuir. "Imaging Nanoscale Patterns on Biologically Derived Microstructures." 2000 16: 5932-5935.

Spector, M. S., K. R. Easwaran, G. Jyothi, J. V. Selinger, A. Singh, and J. M. Schnur. 〈磷脂小管的手性分子自组装:圆二色谱研究〉于《美国国家科学会公报》93, (1996): 12943-6.
Spector, M. S., K. R. Easwaran, G. Jyothi, J. V. Selinger, A. Singh, and J. M. Schnur. "Chiral molecular self-assembly of phospholipid tubules: a circular dichroism study." Proc Natl Acad Sci U S A. 93, (1996): 12943-6.

Heyse, S., T. Stora, E. Schmid, J. H. Lakey, and H. Vogel. 〈研究脂质膜中分子相互作用的新技术《生物化学与生物物理学刊》1376, 3 (10 Nov 1998): 319-38. Review. No abstract available.
Heyse, S., T. Stora, E. Schmid, J. H. Lakey, and H. Vogel. "Emerging techniques for investigating molecular interactions at lipid membranes." Biochim Biophys Acta. 1376, 3 (10 Nov 1998): 319-38. Review. No abstract available.

Aussillous, P., and D. Quere. 〈液态大理石《自然》411, (2001): 924-7.
Aussillous, P., and D. Quere. "Liquid marbles." Nature 411, (2001): 924-7.

Mahadevan, L. 〈无粘性水《自然》411, (2001): 895-6.
Mahadevan, L. "Non-stick water." Nature 411, (2001): 895-6.

Spector, M. S., and J. M. Schnur. 〈脂质膜上DNA的排序《科学》275, (1997): 791-2.
Spector, M. S., and J. M. Schnur. "DNA ordering on a lipid membrane." Science 275, (1997): 791-2.

作为结构材料的糖类
Saccharides as Construction Materials

Semino, C. E.〈作为结构材料之糖类〉(进行中手稿)
Semino, C. E. "Saccharides as construction materials." (manuscript in process).

生动的颜色:瓶罐中的颜料
The Living Colors™ “Paint in a Can”

Yang, F., L. G. Moss, and G. N. Phillips, Jr. 〈绿色荧光蛋白之分子结构〉《国家生物科技》14, (1996): 1246-51.
Yang, F., L. G. Moss, and G. N. Phillips, Jr. "The molecular structure of green fluorescent protein." Nat Biotechnol 14, (1996): 1246-51.

Ormo, M., A. B. Cubitt, K. Kallio, L. A. Gross, R. Y. Tsien, and S. J. Remington. 〈僧帽水母绿色荧光蛋白之晶体构造《科学》273, (1996): 1392-5.
Ormo, M., A. B. Cubitt, K. Kallio, L. A. Gross, R. Y. Tsien, and S. J. Remington. "Crystal structure of the Aequorea victoria green fluorescent protein." Science 273, (1996): 1392-5.

Crameri, A., E. A. Whitehorn, E. Tate, and W. P. Stemmer. 〈移动DNA的分子进化来改善绿色萤光蛋白〉《国家生物科技》14, (1996): 315-9.
Crameri, A., E. A. Whitehorn, E. Tate, and W. P. Stemmer. "Improved green fluorescent protein by molecular evolution using DNA shuffling." Nat Biotechnol 14, (1996): 315-9.

Tsien, R. Y. 〈萤光蛋白之曙光〉《国家生物科技》17, (1999): 956-7.
Tsien, R. Y. "Rosy dawn for fluorescent proteins." Nat Biotechnol 17, (1999): 956-7.

Matz, M. V., A. F. Fradkov, Y. A. Labas, A. P. Savitsky, A. G. Zaraisky, M. L. Markelov, and S. A. Lukyanov. 〈非生物体发光珊瑚虫类之萤光蛋白〉《国家生物科技》17, (1999): 969-73.
Matz, M. V., A. F. Fradkov, Y. A. Labas, A. P. Savitsky, A. G. Zaraisky, M. L. Markelov, and S. A. Lukyanov. "Fluorescent proteins from nonbioluminescent Anthozoa species." Nat Biotechnol 17, (1999): 969-73.

Youvan, D. C., and M. E. Michel-Beyerle. 〈绿色荧光蛋白之结构与发光机制〉《国家生物科技》14, (1996): 1219-20.
Youvan, D. C., and M. E. Michel-Beyerle. "Structure and fluorescence mechanism of GFP." Nat Biotechnol 14, (1996): 1219-20.

其它生物材料设计的例子
Other Examples of Designing Biological Materials

Urry, D. W. 〈新陈代谢与软组织重组中弹性分子机械《生物科技趋势》17, (1999): 249-57.
Urry, D. W. "Elastic molecular machines in metabolism and soft-tissue restoration." Trends Biotechnol 17, (1999): 249-57.

Fernandez-Lopez, S., H. S. Kim, E. C. Choi, M. Delgado, J. R. Granja, A. Khasanov, K. Kraehenbuehl, G. Long, D. A. Weinberger, K. M. Wilcoxen, and M. R. Ghadiri. 〈基于环状D与Lα-肽结构之抗菌素 《自然》412, (2001): 452-5.
Fernandez-Lopez, S., H. S. Kim, E. C. Choi, M. Delgado, J. R. Granja, A. Khasanov, K. Kraehenbuehl, G. Long, D. A. Weinberger, K. M. Wilcoxen, and M. R. Ghadiri. "Antibacterial agents based on the cyclic D,L-alpha-peptide architecture." Nature 412, (2001): 452-5.

Winfree, E., F. Liu, L. A. Wenzler, and N. C. Seeman. 〈二维DNA结晶之设计与自组装《自然》394, (1998): 539-44.
Winfree, E., F. Liu, L. A. Wenzler, and N. C. Seeman. "Design and self-assembly of two-dimensional DNA crystals." Nature 394, (1998): 539-44.

Aggeli, A., I. A. Nyrkova, M. Bell, R. Harding, L. Carrick, T. C. McLeish, A. N. Semenov, and N. Boden. 〈手性杆状分子分级自组装作为β折叠β带、带状物、纤丝与细纤维模型《美国国家科学院刊》98, (2001): 11857-62.
Aggeli, A., I. A. Nyrkova, M. Bell, R. Harding, L. Carrick, T. C. McLeish, A. N. Semenov, and N. Boden. "Hierarchical self-assembly of chiral rod-like molecules as a model for peptide beta -sheet tapes, ribbons, fibrils, and fibers." Proc Natl Acad Sci U S A. 98, (2001): 11857-62.

Xu, G., W. Wang, J. T. Groves, and M. H. Hecht. 〈全新β折叠β蛋白之设计组合库中的自组装单层膜《美国国家科学院刊》98, (2001): 3652-7.
Xu, G., W. Wang, J. T. Groves, and M. H. Hecht. "Self-assembled monolayers from a designed combinatorial library of de novo beta-sheet proteins." Proc Natl Acad Sci U S A. 98, (2001): 3652-7.

West, M. W., W. Wang, J. Patterson, J. D. Mancias, J. R. Beasley, and M. H. Hecht. 〈设计组合库中之新型淀粉样蛋白《美国国家科学院刊》96, (1999): 11211-6.
West, M. W., W. Wang, J. Patterson, J. D. Mancias, J. R. Beasley, and M. H. Hecht. "De novo amyloid proteins from designed combinatorial libraries." Proc Natl Acad Sci U S A. 96, (1999): 11211-6.

Schnur, Joel M. 〈脂质细管:分子工程结构之范例〉《科学》262, (1993): 1669-1676.
Schnur, Joel M. "Lipid Tubules: A Paradigm for Molecularly Engineered Structures." Science 262, (1993): 1669-1676.

Saghatelian, A., Y. Yokobayashi, K. Soltani, and M. R. Ghadiri. 〈手性选择式复制《自然》409, (2001): 797-801.
Saghatelian, A., Y. Yokobayashi, K. Soltani, and M. R. Ghadiri. "A chiroselective peptide replicator." Nature 409, (2001): 797-801.

Mihara, H., and Y. Takahashi.〈历经甲级(α)至乙级(β)转换之工程肽与蛋白《当今结构生物学观点》7, (1997): 501-8.
Mihara, H., and Y. Takahashi. "Engineering peptides and proteins that undergo alpha-to-beta transitions." Curr Opin Struct Biol. 7, (1997): 501-8.

Aggeli, A., M. Bell, N. Boden, J. N. Keen, P. F. Knowles, T. C. McLeish, M. Pitkeathly, and S. E. Radford. 〈由肽自发性自组装形成之反应性凝胶转变为聚合性β折叠β带《自然》386, (1997): 259-62.
Aggeli, A., M. Bell, N. Boden, J. N. Keen, P. F. Knowles, T. C. McLeish, M. Pitkeathly, and S. E. Radford. "Responsive gels formed by the spontaneous self-assembly of peptides into polymeric beta-sheet tapes." Nature 386, (1997): 259-62.

Takahashi, Yuta, Akihiko Ueno, and Hisakazu Mihara. 〈藉由引入憎水性缺陷设计历经甲级(α)至乙级(β)结构转换的肽与淀粉样蛋白原纤丝〉"Design of a Peptide Undergoing alpha - beta Structural Transition and Amyloid Fibrillogenesis by the Introduction of a Hydrophobic Defect 1998, 4:2475-2484.
Takahashi, Yuta, Akihiko Ueno, and Hisakazu Mihara. "Design of a Peptide Undergoing alpha - beta Structural Transition and Amyloid Fibrillogenesis by the Introduction of a Hydrophobic Defect 1998, 4:2475-2484.

Hecht, M. H.〈β折叠蛋白之重新设计《美国国家科学院刊》91, (1994): 8729-30.
Hecht, M. H. "De novo design of beta-sheet proteins." Proc Natl Acad Sci U S A. 91, (1994): 8729-30.

Dobson, C. M. 〈蛋白质错误折叠,演化与疾病《生化科学驱势》24, (1999): 329-32.
Dobson, C. M. "Protein misfolding, evolution and disease." Trends Biochem Sci. 24, (1999): 329-32.

Urry, D. W. 〈藉弹性蛋白基聚合物演示的生物自由能转换物理化学〉《物理学、化学与生物学》101, (1997); 11007-11028.
Urry, D. W. "Physical Chemistry of Biological Free Energy Transduction As Demonstrated by Elastic Protein-Based Polymers J." Phys. Chem. B. 101, (1997); 11007-11028.

Quinn, T. P., N. B. Tweedy, R. W. Williams, J. S. Richardson, and D. C. Richardson. 〈β成对物:β三层蛋白之重新设计、合成与表征《美国国家科学院刊》91, (1994): 8747-51.
Quinn, T. P., N. B. Tweedy, R. W. Williams, J. S. Richardson, and D. C. Richardson. "Betadoublet: de novo design, synthesis, and characterization of a beta-sandwich protein." Proc Natl Acad Sci U S A. 91, (1994): 8747-51.




 
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